| 1 | Marcel Wildhaber (Swi) Scott-Swisspower MTB Racing | 1:00:13 |
| 2 | Enrico Franzoi (Ita) Selle Italia Guerciotti | |
| 3 | Cristian Cominelli (Ita) TX Active Bianchi | 0:00:01 |
| 4 | Fabio Ursi (Ita) C.S.Esercito | 0:00:21 |
| 5 | Simon Zahner (Swi) BMC Racing Team | 0:01:10 |
| 6 | David Kasek (Cze) | 0:01:25 |
| 7 | Marco Ponta (Ita) Esercito | 0:01:29 |
| 8 | Nico Brüngger (Swi) EKZ Racing Team | |
| 9 | Laurent Colombatto (Fra) | |
| 10 | Vladimir Kyzivat (Cze) | 0:01:53 |
| 11 | Théo Dumanchin (Fra) Amcbisontine | 0:02:00 |
| 12 | Raymond Kunzli (Swi) | 0:02:10 |
| 13 | Andreas Moser (Swi) Zaunteam Mittleand-VC Butzberg | 0:02:16 |
| 14 | Markus Bauer (Ger) | 0:02:30 |
| 15 | Ralph Naef (Swi) | 0:03:01 |
| 16 | Michael Winterberg (Swi) | 0:03:24 |
| 17 | Michal Malík (Cze) | 0:03:53 |
| 18 | Matthias Stirnemann (Swi) | 0:03:57 |
| 19 | Vaclav Metlicka (Svk) Johnson Control | 0:04:10 |
| 20 | Pirmin Lang (Swi) | 0:04:25 |
| 21 | Dario Stäuble (Swi) | 0:04:34 |
| 22 | Cyril David (Fra) | 0:04:48 |
| 23 | Severin Sagesser (Swi) | 0:04:49 |
| 24 | Peter Frei (Swi) VC Hittnau | 0:05:03 |
| 25 | Marcus Kaufmann (Ger) | 0:05:31 |
| 26 | Anthony Grand (Swi) Montreux-Rennaz Cyclisme-DOM Cycle | 0:05:38 |
| 27 | Joachim Parbo (Den) Challenge Tires | 0:06:00 |
| 28 | Petr Hampl (Cze) | |
| 29 | Tim Van Nuffel (Bel) DCM-GB Vorselaar | |
| 30 | Markus Kuriger (Swi) TowerSports-VC Eschenbach | |
| 31 | David Guzzardi (Ita) | |
| 32 | Fabian Obrist (Swi) | |
| 33 | Olivier Hofstetter (Swi) | |
