| 1 | Christian Heule (Swi) RendementhypoCycling Team | 1:02:45 |
| 2 | Kamil Ausbuher (Cze) Exe Jeans | 0:00:13 |
| 3 | Luca Damiani (Ita) Colavita Sutter Home | |
| 4 | Vladimír Kyzivát (Cze) Johnson Controls AS MB | 0:00:23 |
| 5 | Lukas Flückiger (Swi) Trek | 0:00:24 |
| 6 | Marco Ponta (Ita) | 0:00:31 |
| 7 | Marcel Wildhaber (Swi) Scott-Swisspower Mountainbike-Team | 0:01:01 |
| 8 | Alessandro Gambino (Ita) Centro Sportivo Esercito | 0:01:09 |
| 9 | Fabio Ursi (Ita) Centro Sportivo Esercito | 0:01:27 |
| 10 | Bryan Falaschi (Ita) | 0:01:38 |
| 11 | Andreas Moser (Swi) Bürgis Cycling Team | 0:01:42 |
| 12 | Pirmin Lang (Swi) VC Bützberg / Delta Elite Team | 0:02:00 |
| 13 | René Lang (Swi) Delta Elite Team/VC Bützberg | 0:02:06 |
| 14 | Geert Wellens (Bel) AVB - Cycling Team | 0:02:17 |
| 15 | Ondrej Bambula (Cze) Cyklo Team Budvar Tábor | 0:02:37 |
| 16 | Vaclav Metlicka (Svk) Team Král | 0:02:49 |
| 17 | Lukas Winterberg (Swi) weishauptcycles. ch / VC Pfaffnau | 0:02:52 |
| 18 | Matthias Flückiger (Swi) VC Bützberg / Trek | 0:03:00 |
| 19 | Kristof Cop (Bel) AVB - Cycling Team | 0:03:35 |
| 20 | Benjamin Buchi (Swi) | 0:03:44 |
| 21 | Yves Corminboeuf (Swi) Scott SRAM Le Marechal | 0:04:23 |
| 22 | Peter Frei (Swi) VC Hittnau | 0:04:38 |
| 23 | Josef Soukup (Cze) | 0:05:33 |
| 24 | Lukáš Príhoda (Cze) Klub Cyklistiky Hlinsko | 0:05:44 |
| 25 | Michele Straccia (Ita) A.S.D. Team Co.Bo Pavoni | 0:05:59 |
| 26 | Martin Hunal (Cze) Velosport Valenta Scott Team | 0:06:33 |
| 27 | Joël Frey (Swi) | 0:00:05 |
| 28 | Sascha Schneider (Ger) Velo + Bike Club Waldshut-Tiengen | 0:00:09 |
| 29 | Jan Chrobák (Cze) Johnson Controls AS MB | 0:00:12 |
| 30 | Pietro Pavoni (Ita) A.S.D. Team Co.Bo Pavoni | 0:01:16 |
| 31 | Matthias Allenspach (Swi) Tower Sports - VC | 0:01:23 |
| 32 | Christoph Muller (Swi) | 0:01:29 |
| 33 | Alessandro Grandi (Ita) | 0:01:49 |
| 34 | Heiko Drechsel (Ger) | 0:01:53 |
| 35 | Samuel Reichen (Swi) | 0:03:01 |
| 36 | Pietro Pavoni (Ita) A.S.D. Team Co.Bo Pavoni | 0:03:09 |
| 37 | Davide Belletti (Ita) Falchi Blu | 0:03:49 |
| 38 | Jérémy Meiller (Fra) | 0:05:06 |
